BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019C06SP1|AL427458
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1000 1916 0.0
>3x_Contig1000
Length = 4837
Score = 1916 bits (966), Expect = 0.0
Identities = 970/972 (99%)
Strand = Plus / Minus
Query: 1 tatccaaaattcttaatgcattattcacaatattatattggttgatttcttcgaagtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 tatccaaaattcttaatgcattattcacaatattatattggttgatttcttcgaagtttg 1569
Query: 61 tttcgacctgaatattgttatctctcatgaatgctgcaatatcgttcttgaatctttcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1568 tttcgacctgaatattgttatctctcatgaatgctgcaatatcgttcttgaatctttcta 1509
Query: 121 atgcaaagacgttatcccttgctactgtaagagccgtctttagtataacttctctgcacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1508 atgcaaagacgttatcccttgctactgtaagagccgtctttagtataacttctctgcacc 1449
Query: 181 cataaagtgaattatggcatttattaagtagtagaacacaagcttcaaatagttcaccat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1448 cataaagtgaattatggcatttattaagtagtagaacacaagcttcaaatagttcaccat 1389
Query: 241 tcagtttttcattattccttttagtgagctttgaaaaggtgggttcaagtgcgcgtttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1388 tcagtttttcattattccttttagtgagctttgaaaaggtgggttcaagtgcgcgtttca 1329
Query: 301 attgaattgatgtggcatttaaccatttggtagttctgtgctttcctggattttttactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1328 attgaattgatgtggcatttaaccatttggtagttctgtgctttcctggattttttactt 1269
Query: 361 caacagcagtatttcctgtagacgttttgatgaaagtttccaaagaagagtcaccatata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1268 caacagcagtatttcctgtagacgttttgatgaaagtttccaaagaagagtcaccatata 1209
Query: 421 ccatacacaatagttctgacatagtcgataatacatcacttgccactttcacatgagtag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1208 ccatacacaatagttctgacatagtcgataatacatcacttgccactttcacatgagtag 1149
Query: 481 tcaaccctggacgagagagaatcttagcaaatgtagagacatttccgggaaccacattac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1148 tcaaccctggacgagagagaatcttagcaaatgtagagacatttccgggaaccacattac 1089
Query: 541 ttaacatttctccgtcatttattactctgtacagtaatcttagtgtttttgagctctcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1088 ttaacatttctccgtcatttattactctgtacagtaatcttagtgtttttgagctctcta 1029
Query: 601 actggattgacatattgctattttctaataatgttaacaaaatggtgattgagtgtgcta 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 1028 actggattgacatattgctattttctaataatgttaacaaaatggtgattgagtgtgcaa 969
Query: 661 ttgctgggagcatatttgcatcccattccttgaaagctgctgtggaatacaaaactctta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 ttgctgggagcatatttgcatcccattccttgaaagctgctgtggaatacaaaactctta 909
Query: 721 aaagtctgatggaagcaatcttgaattcgtctggtttattgggaaggttgacattttcta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 aaagtctgatggaagcaatcttgaattcgtctggtttattgggaaggttgacattttcta 849
Query: 781 gatcggtagatattagaaaggttgatagggaaagaagctgcgagaatgtgttccgatcca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 gatcggtagatattagaaaggttgatagggaaagaagctgcgagaatgtgttccgatcca 789
Query: 841 ctgtcgccggtaaactccacgaaacgtctattattctcgccaaaatttcgaatactaatg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 ctgtcgccggtaaactccacgaaacgtctattattctcgccaaaatttcgaatactaatg 729
Query: 901 ttgcaattgggtccggaagtgatttacacgttttcmacattgcagagataggcacaaaca 960
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 728 ttgcaattgggtccggaagtgatttacacgttttcaacattgcagagataggcacaaaca 669
Query: 961 catagtctccaa 972
||||||||||||
Sbjct: 668 catagtctccaa 657
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7220
Number of Sequences: 1807
Number of extensions: 7220
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)